[dnanian]

OK, let me be more explicit about what you have to do:

Each of those two scripts also is a script. Double-clicking it will show you what the script contains. Then, switch to the commands tab. You'll see a list of files and folders. Those are the excluded ones (the command in front, ignore, tells SuperDuper! to not copy).

Here's a complete list:

.Trashes (the system/root level trash can -- not your personal one)
.vol (a special system folder, recreated dynamically)
.journal_info_block (special, disk-specific file for journaling)
.journal (ditto)
mach (OS boot file, recreated by SuperDuper, volume specific)
mach.sym (ditto)
Temporary Items (temporary items)
Desktop DB (OS9 desktop, rebuilt automatically)
Desktop DF (ditto)
Volumes (contents, recreated automatically by OS)
cores (contents, core dumps, technical stuff, temporary)
private/Network/* (special network browser info, created by OS at boot)
private/_Network_/* (ditto)
private/var/vm (special OS swapfiles, created as needed by OS)
private/automount/* (special network browser info, created by OS)
/private/var/tmp/* (temporary files)
private/var/run (special temporary files)
private/automount/* (special network browser info, created by OS)
Library/Frameworks/Stuffit.framework/.DS_Store (special bad file created by some installs of Stuffit)

To open the folders, you'll use "Go To Folder..." in the Finder. Even if you can't "see" the folder in the main window, you'll be able to open most folders using the finder this way.

Note, though -- if you're uncomfortable with the Terminal (which you don't have to use), I'm not entirely sure what you're going to make of the contents of these ignored folders and files! These are pretty low-level things that we've ignored because Apple has said they shouldn't be copied, for the most part. If they're large on your system, that's unusual, but it'd require someone with pretty thorough OS X knowledge to diagnose completely. But it's very, very, very unlikely that your own files are stored in these locations.

I hope that explains a bit better.